hom*ozygous variant in DRC3 (LRRC48) gene causes asthenozoospermia and male infertility (2024)

  • Article
  • Published:
  • Jiao Qin1,2,
  • Jinyu Wang3,
  • Jianhai Chen4,
  • Jinyan Xu1,2,
  • Shanling Liu3,
  • Dong Deng5 &
  • Fuping Li1,2

Journal of Human Genetics (2024)Cite this article

  • 6 Accesses

  • 1 Altmetric

  • Metrics details

Subjects

  • Diseases
  • Mutation

Abstract

Human infertility affects 10–15% of couples. Asthenozoospermia accounts for 18% of men with infertility and is a common male infertility phenotype. The nexin-dynein regulatory complex (N-DRC) is a large protein complex in the sperm flagellum that connects adjacent doublets of microtubules. Defects in the N-DRC can disrupt cilia/flagellum movement, resulting in primary ciliary dyskinesia and male infertility. Using whole-exome sequencing, we identified a pathological hom*ozygous variant of the dynein regulatory complex subunit 3 (DRC3) gene, which expresses leucine-rich repeat-containing protein 48, a component of the N-DRC, in a patient with asthenozoospermia. The variant ENST00000313838.12: c.644dup (p. Glu216GlyfsTer36) causes premature translational arrest of DRC3, resulting in a dysfunctional DRC3 protein. The patient’s sem*n count, color, and pH were normal according to the reference values of the World Health Organization guidelines; however, sperm motility and progressive motility were reduced. DRC3 protein was not detected in the patient’s sperm and the ultrastructure of the patient’s sperm flagella was destroyed. More importantly, the DRC3 variant reduced its interaction with other components of the N-DRC, including dynein regulatory complex subunits 1, 2, 4, 5, 7, and 8. Our data not only revealed the essential biological functions of DRC3 in sperm flagellum movement and structure but also provided a new basis for the clinical genetic diagnosis of male infertility.

This is a preview of subscription content, access via your institution

Access options

Access through your institution

Change institution

Buy or subscribe

Subscribe to this journal

Receive 12 print issues and online access

$259.00 per year

only $21.58 per issue

Learn more

Buy this article

  • Purchase on Springer Link
  • Instant access to full article PDF

Prices may be subject to local taxes which are calculated during checkout

hom*ozygous variant in DRC3 (LRRC48) gene causes asthenozoospermia and male infertility (1)
hom*ozygous variant in DRC3 (LRRC48) gene causes asthenozoospermia and male infertility (2)
hom*ozygous variant in DRC3 (LRRC48) gene causes asthenozoospermia and male infertility (3)
hom*ozygous variant in DRC3 (LRRC48) gene causes asthenozoospermia and male infertility (4)
hom*ozygous variant in DRC3 (LRRC48) gene causes asthenozoospermia and male infertility (5)

Similar content being viewed by others

hom*ozygous variant in DRC3 (LRRC48) gene causes asthenozoospermia and male infertility (6)

Identification of DNAH6 mutations in infertile men with multiple morphological abnormalities of the sperm flagella

Article Open access 01 November 2019

hom*ozygous variant in DRC3 (LRRC48) gene causes asthenozoospermia and male infertility (7)

Bi-allelic variants in human WDR63 cause male infertility via abnormal inner dynein arms assembly

Article Open access 16 November 2021

hom*ozygous variant in DRC3 (LRRC48) gene causes asthenozoospermia and male infertility (8)

Bi-allelic variants in human TCTE1/DRC5 cause asthenospermia and male infertility

Article 07 April 2022

References

  1. Bhasin S, de Kretser DM, Baker HW. Clinical review 64: pathophysiology and natural history of male infertility. J Clin Endocrinol Metab. 1994;79:1525–9.

    CAS PubMed Google Scholar

  2. Ford WC. Comments on the release of the 5th edition of the WHO Laboratory Manual for the Examination and Processing of Human sem*n. Asian J Androl. 2010;12:59–63.

    Article CAS PubMed PubMed Central Google Scholar

  3. Castaneda JM, Hua R, Miyata H, Oji A, Guo Y, Cheng Y, et al. TCTE1 is a conserved component of the dynein regulatory complex and is required for motility and metabolism in mouse spermatozoa. Proc Natl Acad Sci USA. 2017;114:E5370–E78.

    Article CAS PubMed PubMed Central Google Scholar

  4. Inaba K. Molecular basis of sperm flagellar axonemes: structural and evolutionary aspects. Ann N. Y Acad Sci. 2007;1101:506–26.

    Article CAS PubMed Google Scholar

  5. Heuser T, Raytchev M, Krell J, Porter ME, Nicastro D. The dynein regulatory complex is the nexin link and a major regulatory node in cilia and flagella. J Cell Biol. 2009;187:921–33.

    Article CAS PubMed PubMed Central Google Scholar

  6. Bower R, Tritschler D, Vanderwaal K, Perrone CA, Mueller J, Fox L, et al. The N-DRC forms a conserved biochemical complex that maintains outer doublet alignment and limits microtubule sliding in motile axonemes. Mol Biol Cell. 2013;24:1134–52.

    Article CAS PubMed PubMed Central Google Scholar

  7. Ghanaeian A, Majhi S, McCafferty CL, Nami B, Black CS, Yang SK, et al. Integrated modeling of the Nexin-dynein regulatory complex reveals its regulatory mechanism. Nat Commun. 2023;14:5741.

    Article CAS PubMed PubMed Central Google Scholar

  8. Lin J, Tritschler D, Song K, Barber CF, Cobb JS, Porter ME, et al. Building blocks of the nexin-dynein regulatory complex in Chlamydomonas flagella. J Biol Chem. 2011;286:29175–91.

    Article CAS PubMed PubMed Central Google Scholar

  9. Awata J, Song K, Lin J, King SM, Sanderson MJ, Nicastro D, et al. DRC3 connects the N-DRC to dynein g to regulate flagellar waveform. Mol Biol Cell. 2015;26:2788–800.

    Article PubMed PubMed Central Google Scholar

  10. Zhou S, Yuan S, Zhang J, Meng L, Zhang X, Liu S, et al. DRC3 is an assembly adapter of the nexin-dynein regulatory complex functional components during spermatogenesis in humans and mice. Signal Transduct Target Ther. 2023;8:26.

    Article CAS PubMed PubMed Central Google Scholar

  11. Chen J, Zhang P, Chen H, Wang X, He X, Zhong J, et al. Whole-genome sequencing identifies rare missense variants of WNT16 and ERVW-1 causing the systemic lupus erythematosus. Genomics. 2022;114:110332.

    Article CAS PubMed Google Scholar

  12. Oud MS, Houston BJ, Volozonoka L, Mastrorosa FK, Holt GS, Alobaidi BKS, et al. Exome sequencing reveals variants in known and novel candidate genes for severe sperm motility disorders. Hum Reprod. 2021;36:2597–611.

    Article CAS PubMed PubMed Central Google Scholar

  13. Jia Y, Chen J, Zhong J, He X, Zeng L, Wang Y, et al. Novel rare mutation in a conserved site of PTPRB causes human hypoplastic left heart syndrome. Clin Genet. 2023;103:79–86.

    Article CAS PubMed Google Scholar

  14. Hubbard T, Barker D, Birney E, Cameron G, Chen Y, Clark L, et al. The Ensembl genome database project. Nucleic Acids Res. 2002;30:38–41.

    Article CAS PubMed PubMed Central Google Scholar

  15. Pereira R, Carvalho V, Dias C, Barbosa T, Oliveira J, Alves A, et al. Characterization of a DRC1 null variant associated with primary ciliary dyskinesia and female infertility. J Assist Reprod Genet. 2023;40:765–78.

    Article CAS PubMed PubMed Central Google Scholar

  16. Zhang X, Wang L, Ma Y, Wang Y, Liu H, Liu M, et al. CEP128 is involved in spermatogenesis in humans and mice. Nat Commun. 2022;13:1395.

    Article CAS PubMed PubMed Central Google Scholar

  17. Oda T, Yanagisawa H, Kikkawa M. Detailed structural and biochemical characterization of the nexin-dynein regulatory complex. Mol Biol Cell. 2015;26:294–304.

    Article PubMed PubMed Central Google Scholar

  18. Jeanson L, Thomas L, Copin B, Coste A, Sermet-Gaudelus I, Dastot-Le Moal F, et al. Mutations in GAS8, a gene encoding a nexin-dynein regulatory complex subunit, cause primary ciliary dyskinesia with axonemal disorganization. Hum Mutat. 2016;37:776–85.

    Article CAS PubMed Google Scholar

  19. Lei C, Yang D, Wang R, Ding S, Wang L, Guo T, et al. DRC1 deficiency caused primary ciliary dyskinesia and MMAF in a Chinese patient. J Hum Genet. 2022;67:197–201.

    Article CAS PubMed Google Scholar

  20. Keicho N, Hijikata M, Morimoto K, Homma S, Taguchi Y, Azuma A, et al. Primary ciliary dyskinesia caused by a large hom*ozygous deletion including exons 1-4 of DRC1 in Japanese patients with recurrent sinopulmonary infection. Mol Genet Genom Med. 2020;8:e1033.

    Article Google Scholar

  21. Olbrich H, Cremers C, Loges NT, Werner C, Nielsen KG, Marthin JK, et al. Loss-of-function GAS8 mutations cause primary ciliary dyskinesia and disrupt the nexin-dynein regulatory complex. Am J Hum Genet. 2015;97:546–54.

    Article CAS PubMed PubMed Central Google Scholar

  22. Morohoshi A, Miyata H, Shimada K, Nozawa K, Matsumura T, Yanase R, et al. Nexin-Dynein regulatory complex component DRC7 but not FBXL13 is required for sperm flagellum formation and male fertility in mice. PLoS Genet. 2020;16:e1008585.

    Article CAS PubMed PubMed Central Google Scholar

  23. Zhang J, He X, Wu H, Zhang X, Yang S, Liu C, et al. Loss of DRC1 function leads to multiple morphological abnormalities of the sperm flagella and male infertility in human and mouse. Hum Mol Genet. 2021;30:1996–2011.

    Article CAS PubMed PubMed Central Google Scholar

  24. Takeuchi K, Xu Y, Kitano M, Chiyonobu K, Abo M, Ikegami K, et al. Copy number variation in DRC1 is the major cause of primary ciliary dyskinesia in the Japanese population. Mol Genet Genom Med. 2020;8:e1137.

    Article CAS Google Scholar

  25. Zhou S, Wu H, Zhang J, He X, Liu S, Zhou P, et al. Bi-allelic variants in human TCTE1/DRC5 cause asthenospermia and male infertility. Eur J Hum Genet. 2022;30:721–29.

    Article CAS PubMed PubMed Central Google Scholar

  26. Huang B, Ramanis Z, Luck DJ. Suppressor mutations in Chlamydomonas reveal a regulatory mechanism for Flagellar function. Cell. 1982;28:115–24.

    Article CAS PubMed Google Scholar

  27. Luck DJ, Huang B, Piperno G. Genetic and biochemical analysis of the eukaryotic flagellum. Symp Soc Exp Biol. 1982;35:399–419.

    CAS PubMed Google Scholar

  28. Piperno G, Mead K, LeDizet M, Moscatelli A. Mutations in the “dynein regulatory complex” alter the ATP-insensitive binding sites for inner arm dyneins in Chlamydomonas axonemes. J Cell Biol. 1994;125:1109–17.

    Article CAS PubMed Google Scholar

  29. Walton T, Gui M, Velkova S, Fassad MR, Hirst RA, Haarman E, et al. Axonemal structures reveal mechanoregulatory and disease mechanisms. Nature. 2023;618:625–33.

    Article CAS PubMed PubMed Central Google Scholar

Download references

Acknowledgements

We wish to thank the patient and medical staff of Department of Andrology/Sichuan Human Sperm Bank, West China Second University Hospital.

Funding

This study was supported by the Clinical Discipline Development Fund, West China Second University Hospital of China (KL061).

Author information

Authors and Affiliations

  1. Department of Andrology/Sichuan Human Sperm Bank, West China Second University Hospital, Sichuan University, Chengdu, China

    Jiao Qin,Jinyan Xu&Fuping Li

  2. Key Laboratory of Birth Defects and Related Diseases of Women and Children (Sichuan University), Ministry of Education, Chengdu, China

    Jiao Qin,Jinyan Xu&Fuping Li

  3. Department of Medical Genetics, West China Second University Hospital of Sichuan University, Chengdu, 610041, China

    Jinyu Wang&Shanling Liu

  4. Department of Ecology and Evolution, Biological Sciences Division, The University of Chicago, 1101 E 57th Street, Chicago, IL, 60637, USA

    Jianhai Chen

  5. Department of Obstetrics, Key Laboratory of Birth Defects and Related Disease of Women and Children of MOE, State Key Laboratory of Biotherapy, West China Second Hospital, Sichuan University, Chengdu, 610041, China

    Dong Deng

Authors

  1. Jiao Qin

    View author publications

    You can also search for this author in PubMedGoogle Scholar

  2. Jinyu Wang

    View author publications

    You can also search for this author in PubMedGoogle Scholar

  3. Jianhai Chen

    View author publications

    You can also search for this author in PubMedGoogle Scholar

  4. Jinyan Xu

    View author publications

    You can also search for this author in PubMedGoogle Scholar

  5. Shanling Liu

    View author publications

    You can also search for this author in PubMedGoogle Scholar

  6. Dong Deng

    View author publications

    You can also search for this author in PubMedGoogle Scholar

  7. Fuping Li

    View author publications

    You can also search for this author in PubMedGoogle Scholar

Contributions

Jiao Qin designed the study and wrote the paper. Jinyu Wang performed the experiments and analyzed the data. Jianhai Chen analyzed the sequencing data and identified the variant gene. Jinyan Xu collected clinical samples and signed informed consent with human subjects, Fuping Li, Dong Deng and Shanling Liu directed this study.

Corresponding authors

Correspondence to Shanling Liu, Dong Deng or Fuping Li.

Ethics declarations

Competing interests

The authors declare that the research was conducted without any commercial or financial relationships that could be construed as a potential conflict of interest.

Ethics

The study was reviewed and approved by Review Board of the West China Second University Hospital in China, Number 2020-102. All human subjects provided informed consent for this study.

Additional information

Publisher’s note Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.

Rights and permissions

Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law.

Reprints and permissions

About this article

hom*ozygous variant in DRC3 (LRRC48) gene causes asthenozoospermia and male infertility (9)

Cite this article

Qin, J., Wang, J., Chen, J. et al. hom*ozygous variant in DRC3 (LRRC48) gene causes asthenozoospermia and male infertility. J Hum Genet (2024). https://doi.org/10.1038/s10038-024-01253-6

Download citation

  • Received:

  • Revised:

  • Accepted:

  • Published:

  • DOI: https://doi.org/10.1038/s10038-024-01253-6

hom*ozygous variant in DRC3 (LRRC48) gene causes asthenozoospermia and male infertility (2024)

References

Top Articles
Latest Posts
Article information

Author: Velia Krajcik

Last Updated:

Views: 5846

Rating: 4.3 / 5 (54 voted)

Reviews: 93% of readers found this page helpful

Author information

Name: Velia Krajcik

Birthday: 1996-07-27

Address: 520 Balistreri Mount, South Armand, OR 60528

Phone: +466880739437

Job: Future Retail Associate

Hobby: Polo, Scouting, Worldbuilding, Cosplaying, Photography, Rowing, Nordic skating

Introduction: My name is Velia Krajcik, I am a handsome, clean, lucky, gleaming, magnificent, proud, glorious person who loves writing and wants to share my knowledge and understanding with you.